Data Science in the News

Digital twins for cancer patients could be ‘paradigm shift’ for predictive oncology

A multi-institutional team, including an LLNL contributor, has proposed a framework for digital twin models of cancer patients that researchers say would create a “paradigm shift” for predictive oncology. Published online Nature Medicine on November 25, the proposed framework for Cancer Patient Digital Twins (CPDTs) — virtual representations of cancer patients using real-time data — would...

Lab-led effort one of nine DOE-funded data reduction projects

An LLNL-led effort in data compression was one of nine projects recently funded by the DOE for research aimed at shrinking the amount of data needed to advance scientific discovery. Under the project—ComPRESS: Compression and Progressive Retrieval for Exascale Simulations and Sensors—LLNL scientists will seek better understanding of data-compression errors, develop models to increase trust in...

Visualization software stands the test of time

In the decades since LLNL’s founding, the technology used in pursuit of the Laboratory’s national security mission has changed over time. For example, studying scientific phenomena and predicting their behaviors require increasingly robust, high-resolution simulations. These crucial tasks compound the demands on high-performance computing hardware and software, which must continually be...

60 years of cancer research

From studying radioactive isotope effects to better understanding cancer metastasis, the Laboratory’s relationship with cancer research endures some 60 years after it began, with historical precedent underpinning exciting new research areas. In one Cancer Moonshot project, research includes a close synergy between experiments and computation, allowing scientists to get a better picture of the...

COVID-19 detection and analysis with Nisha Mulakken (VIDEO)

LLNL biostatistician Nisha Mulakken has enhanced the Lawrence Livermore Microbial Detection Array (LLMDA) system with detection capability for all variants of SARS-CoV-2. The technology detects a broad range of organisms—viruses, bacteria, archaea, protozoa, and fungi—and has demonstrated novel species identification for human health, animal health, biodefense, and environmental sampling...

Advanced Data Analytics for Proliferation Detection shares technical advances during two-day meeting

The Advanced Data Analytics for Proliferation Detection (ADAPD) program held a two-day virtual technical exchange meeting recently. The goal of the meeting was to highlight the science-based and data-driven analysis work conducted by ADAPD to advance the state-of-the-art to accelerate artificial intelligence (AI) innovation and develop AI-enabled systems to enhance the United States’...

Virtual seminar series explores data-driven physical simulations

The rapidly growing fields of artificial intelligence (AI) and machine learning (ML) have become cornerstones of LLNL’s data science research activities. The Lab’s scientific community regularly publishes advancements in both AI/ML applications and theory, contributing to international discourse on the possibilities of these compelling technologies. The large volume of AI/ML scientific...

Lab researchers explore ‘learn-by-calibration’ approach to deep learning to accurately emulate scientific process

An LLNL team has developed a “Learn-by-Calibrating” method for creating powerful scientific emulators that could be used as proxies for far more computationally intensive simulators. Researchers found the approach results in high-quality predictive models that are closer to real-world data and better calibrated than previous state-of-the-art methods. The LbC approach is based on interval...

From intern to mentor, Nisha Mulakken builds a career in bioinformatics

The COVID-19 pandemic has sparked a wave of new research and development at the Lab, and Nisha Mulakken is very busy. The biostatistician has enhanced the Lawrence Livermore Microbial Detection Array (LLMDA) system with detection capability for all variants of SARS-CoV-2. The technology detects a broad range of organisms—viruses, bacteria, archaea, protozoa, and fungi—and has demonstrated...

Advancing healthcare with data science (VIDEO)

This video provides an overview of projects in which data scientists work with domain scientists to address major challenges in healthcare. To help fight the COVID-19 pandemic, researchers are developing computer models to search for potential antibody and antiviral drug treatments, sharing a data portal with scientists and the general public, and analyzing drug compounds via a novel text...

Lab team studies calibrated AI and deep learning models to more reliably diagnose and treat disease

A team led by LLNL computer scientist Jay Thiagarajan has developed a new approach for improving the reliability of artificial intelligence and deep learning-based models used for critical applications, such as health care. Thiagarajan recently applied the method to study chest X-ray images of patients diagnosed with COVID-19, arising due to the novel SARS-Cov-2 coronavirus. Read more at LLNL...

COVID-19 research goes public through new portal

A new online data portal is making available to the public a wealth of data LLNL scientists have gathered from their ongoing COVID-19 molecular design projects, particularly the computer-based “virtual” screening of small molecules and designed antibodies for interactions with the SARS-CoV-2 virus for drug design purposes. The portal houses a wealth of data LLNL scientists have gathered from...

Interpretable AI in healthcare (PODCAST)

LLNL's Jay Thiagarajan joins the Data Skeptic podcast to discuss his recent paper "Calibrating Healthcare AI: Towards Reliable and Interpretable Deep Predictive Models." The episode runs 35:50. Listen at Data Skeptic.

The incorporation of machine learning into scientific simulations at LLNL (VIDEO)

In this video from the Stanford HPC Conference, Katie Lewis presents "The Incorporation of Machine Learning into Scientific Simulations at Lawrence Livermore National Laboratory." Read more and watch the video at insideHPC.

Using data to build a secure future (PODCAST)

On the Hidden in Plain Sight podcast, LLNL director Bill Goldstein explains how the Lab crunches data to shape the future. Listen at Mission.org.

New partnership results in increased access to compelling 'real world data'

Through a new partnership between the UC San Diego Library, Halıcıoğlu Data Science Institute (HDSI), and LLNL's Data Science Institute, UCSD library patrons can now access and analyze two new “real world” data sets from LLNL. The Open Data Initiative collection shares some of LLNL’s challenging and unique data sets, which range in complexity from large-scale, domain-specific simulated data...

LLNL creates web resources to aid in fight against COVID-19

LLNL is fully committed to helping protect the U.S. from COVID-19 and to speed the recovery of those affected. As a world-class research institute, we have considerable infrastructure, unique research capabilities and a dedicated team of scientists and engineers supporting the fight against the COVID-19 pandemic. Our current COVID-19 research and response activities are focused on four broad...

Lab antibody, anti-viral research aids COVID-19 response

LLNL scientists are contributing to the global fight against COVID-19 by combining artificial intelligence/machine learning, bioinformatics and supercomputing to help discover candidates for new antibodies and pharmaceutical drugs to combat the disease. Armed with the virus’ predicted 3D structure and a few antibodies known to bind and neutralize SARS, an LLNL team led by Daniel Faissol and...

DSI sponsors LLNL hackathon

Since 2012, Lawrence Livermore National Laboratory’s (LLNL’s) Computing directorate has held hackathons three times a year. These spring, summer, and fall events are scheduled over 24 hours and invite software teams to work on new ideas, programming languages, open-source tools, or project tasks. Exploration and experimentation are highly encouraged, and “It’s OK to fail” is the event mantra...

Department of Energy researchers share data management strategies at first-ever “Data Day”

It’s become something of a mantra of the digital age: Data is the new currency. Especially in science, where it’s hard to find a single project that doesn’t involve generating or consuming massive amounts of data. In light of the growing awareness of the critical importance of data management across the Department of Energy complex, more than 100 researchers from DOE national laboratories...