Data Science in the News

From intern to mentor, Nisha Mulakken builds a career in bioinformatics

The COVID-19 pandemic has sparked a wave of new research and development at the Lab, and Nisha Mulakken is very busy. The biostatistician has enhanced the Lawrence Livermore Microbial Detection Array (LLMDA) system with detection capability for all variants of SARS-CoV-2. The technology detects a broad range of organisms—viruses, bacteria, archaea, protozoa, and fungi—and has demonstrated...

Machine learning speeds up and enhances physics calculations

Interpreting data from NIF’s cutting-edge high energy density science experiments relies on physics calculations that are so complex they can challenge LLNL supercomputers, which stand among the best in the world. A collaboration between LLNL and French researchers found a novel way to incorporate machine learning and neural networks to significantly speed up inertial confinement fusion...

Advancing healthcare with data science (VIDEO)

This video provides an overview of projects in which data scientists work with domain scientists to address major challenges in healthcare. To help fight the COVID-19 pandemic, researchers are developing computer models to search for potential antibody and antiviral drug treatments, sharing a data portal with scientists and the general public, and analyzing drug compounds via a novel text...

Lockdown doesn’t hinder annual Data Science Challenge

Due to the COVID-19 pandemic and shelter-in-place restrictions, this year’s Data Science Challenge with the University of California, Merced was an all-virtual offering. The two-week challenge involved 21 UC Merced students who worked from their homes through video conferencing and chat programs to develop machine learning models capable of differentiating potentially explosive materials from...

Modeling neuronal cultures on 'brain-on-a-chip' devices

For the past several years, LLNL scientists and engineers have made significant progress in development of a three-dimensional “brain-on-a-chip” device capable of recording neural activity of human brain cell cultures grown outside the body. The team has developed a statistical model for analyzing the structures of neuronal networks that form among brain cells seeded on in vitro brain-on-a...

UC Merced students receive NSF research fellowships

Maia Powell, a PhD student in Applied Mathematics at UC Merced, has been awarded a National Science Foundation Graduate Research Fellowship. Powell participated in the DSI's Data Science Challenge this summer, serving as a team lead for other students. Read more at UC Merced.

AI identifies change in microstructure in aging materials

LLNL scientists have taken a step forward in the design of future materials with improved performance by analyzing its microstructure using AI. The work recently appeared online in the journal Computational Materials Science. Read more at LLNL News.

COVID-19 research goes public through new portal

A new online data portal is making available to the public a wealth of data LLNL scientists have gathered from their ongoing COVID-19 molecular design projects, particularly the computer-based “virtual” screening of small molecules and designed antibodies for interactions with the SARS-CoV-2 virus for drug design purposes. The portal houses a wealth of data LLNL scientists have gathered from...

New ML platform generates novel COVID-19 antibody sequences for experimental testing

LLNL researchers have identified an initial set of therapeutic antibody sequences, designed in a few weeks using machine learning and supercomputing, aimed at binding and neutralizing SARS-CoV-2, the virus that causes COVID-19. The research team is performing experimental testing on the chosen antibody designs. Read more at LLNL News.

Upgrades for LLNL supercomputer from AMD, Penguin Computing aid COVID-19 research

Under a new agreement, AMD will supply upgraded graphics accelerators for LLNL’s Corona supercomputing cluster, expected to nearly double the system’s peak compute power. The system will be used by scientists through the public/private COVID-19 HPC Consortium, and by LLNL researchers, who are working on discovering potential antibodies and anti-viral compounds for SARS-CoV-2, the virus that...

Local Women in Data Science conference showcases Lab research

For the third consecutive year, LLNL hosted a Women in Data Science (WiDS) regional event on March 2. The event drew dozens of attendees from LLNL, Sandia National Laboratories, local universities, and Bay Area commercial companies. Livermore was one of over 200 regional events in 60 countries coordinated with the main WiDS conference at Stanford University. According to the WiDS website...

LLNL creates web resources to aid in fight against COVID-19

LLNL is fully committed to helping protect the U.S. from COVID-19 and to speed the recovery of those affected. As a world-class research institute, we have considerable infrastructure, unique research capabilities and a dedicated team of scientists and engineers supporting the fight against the COVID-19 pandemic. Our current COVID-19 research and response activities are focused on four broad...

New partnership to unleash U.S. supercomputing resources in the fight against COVID-19

The White House announced the launch of the COVID-19 High Performance Computing Consortium to provide COVID-19 researchers worldwide with access to the world’s most powerful high performance computing resources that can significantly advance the pace of scientific discovery in the fight to stop the virus. Read more at LLNL News.

Lab antibody, anti-viral research aids COVID-19 response

LLNL scientists are contributing to the global fight against COVID-19 by combining artificial intelligence/machine learning, bioinformatics and supercomputing to help discover candidates for new antibodies and pharmaceutical drugs to combat the disease. Armed with the virus’ predicted 3D structure and a few antibodies known to bind and neutralize SARS, an LLNL team led by Daniel Faissol and...

Lab leads effort to model proteins tied to cancer

Computational scientists, biophysicists and statisticians from LLNL and Los Alamos National Laboratory(LANL) are leading a massive multi-institutional collaboration that has developed a machine learning-based simulation for next-generation supercomputers capable of modeling protein interactions and mutations that play a role in many forms of cancer. Read more at LLNL News.

Livermore Lab Foundation awards scholarship to Cal State East Bay computer science student

Alan Noun, a computer science student at Cal State University East Bay and the recipient of the Livermore Lab Foundation's first full-year scholarship, has started a summer internship at LLNL. In partnership with Cal State University East Bay (CSUEB), the Livermore Lab Foundation (LLF) awarded Noun a one-year stipend to allow him to devote more time to academics by reducing work he needs to...

Two-week workshop lets UC Merced students step into shoes of Lab computer scientists

From May 20-31, 21 undergraduate and graduate students, many of them first-generation college students, interned at the Lab. While they were on site, the students, along with their Lab mentors, were tasked with using machine learning and other computational methods to tackle real-world problems in computational immunology. Read more at LLNL News.

NFL comes to Lab to hear latest on TBI research

Officials from the National Football League visited LLNL to hear how the Department of Energy’s national laboratories are using high-performance computing and artificial intelligence to advance scientific understanding of traumatic brain injury (TBI). Read more at LLNL News.

Multi-institutional meeting centers on making the 'impossible' possible in cancer research

Computer scientists, biomedical engineers, cancer biologists and bioinformaticians from eight Department of Energy national laboratories, health-related government agencies and universities converged at LLNL March 6-7 to discuss ongoing efforts to advance cancer research through computation, identify existing challenges and brainstorm future multidisciplinary projects. Read more at LLNL News...

CASC research showcased at major data science venues

Researchers from LLNL’s Center for Applied Scientific Computing (CASC) are among the Lab’s employees making waves in the data science community, with many prominent accolades, publications, and acceptances in 2018. Data science encompasses some of the hottest technology topics—machine learning (ML), “big data” analysis, artificial intelligence, computer vision, and more—and the Center’s...