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Kevin McLoughlin applies computational biology to complex problems
May 17, 2022 -
Kevin McLoughlin has always been fascinated by the intersection of computing and biology. His LLNL career encompasses award-winning microbial detection technology, a COVID-19 antiviral drug design pipeline, and work with the ATOM consortium. The appeal for him in these projects lies at the intersection of computing and biology. “I love finding ways to visualize data that reveal relationships...
NNSA and Cornelis Networks to collaborate on next-generation high-performance networking
May 4, 2022 -
The Next-Generation High Performance Computing Network (NG-HPCN) project for the NNSA’s Advanced Simulation and Computing (ASC) program will enable NNSA to co-design and partner with Cornelis on development and productization of next-generation interconnect technologies for HPC. The project is led by LLNL for the NNSA Tri-Labs: LLNL, Los Alamos and Sandia national laboratories. The resulting...
Accelerating the path to precision medicine
March 22, 2022 -
LLNL joined the Transforming Research and Clinical Knowledge in Traumatic Brain Injury (TRACK-TBI) consortium in 2018. The national, multiyear, multidisciplinary effort, led by the University of California at San Francisco in collaboration with Lawrence Berkeley and Argonne national laboratories and other leading research organizations and universities, combines neuroimaging, blood-based...
Machine learning model finds COVID-19 risks for cancer patients
March 10, 2022 -
A new study by researchers at LLNL and the University of California, San Francisco, looks to identify cancer-related risks for poor outcomes from COVID-19. Analyzing one of the largest databases of patients with cancer and COVID-19, the team found previously unreported links between a rare type of cancer—as well as two cancer treatment-related drugs—and an increased risk of hospitalization...
LLNL team models COVID-19 disease progression and identifies risk factors
Feb. 15, 2022 -
An LLNL team has developed a comprehensive dynamic model of COVID-19 disease progression in hospitalized patients, finding that risk factors for complications from the disease are dependent on the patient’s disease state. Using a machine learning algorithm on a dataset of electronic health records from more than 1,300 hospitalized COVID-19 patients with ProMedica — the largest health care...
COVID-19 R&D: Computing responds to pandemic
Jan. 19, 2022 -
When the COVID-19 pandemic began, the Laboratory immediately started seeking solutions to the myriad challenges posed by the global crisis. The Computing Directorate jumped right in with research and development activities that combine molecular screening to inform antiviral drug experimentation; a generative molecular design software platform to optimize properties of antiviral drugs; an...
Unprecedented multiscale model of protein behavior linked to cancer-causing mutations
Jan. 10, 2022 -
LLNL researchers and a multi-institutional team have developed a highly detailed, machine learning–backed multiscale model revealing the importance of lipids to the signaling dynamics of RAS, a family of proteins whose mutations are linked to numerous cancers. Published by the Proceedings of the National Academy of Sciences, the paper details the methodology behind the Multiscale Machine...
LLNL establishes AI Innovation Incubator to advance artificial intelligence for applied science
Dec. 20, 2021 -
LLNL has established the AI Innovation Incubator (AI3), a collaborative hub aimed at uniting experts in artificial intelligence (AI) from LLNL, industry and academia to advance AI for large-scale scientific and commercial applications. LLNL has entered into a new memoranda of understanding with Google, IBM and NVIDIA, with plans to use the incubator to facilitate discussions and form future...
Digital twins for cancer patients could be ‘paradigm shift’ for predictive oncology
Dec. 16, 2021 -
A multi-institutional team, including an LLNL contributor, has proposed a framework for digital twin models of cancer patients that researchers say would create a “paradigm shift” for predictive oncology. Published online Nature Medicine on November 25, the proposed framework for Cancer Patient Digital Twins (CPDTs) — virtual representations of cancer patients using real-time data — would...
U.S. Department of Energy to showcase national lab expertise at SC21
Nov. 11, 2021 -
The scientific computing and networking leadership of the U.S. Department of Energy’s (DOE’s) national laboratories will be on display at SC21, the International Conference for High-Performance Computing, Networking, Storage and Analysis. The conference takes place Nov. 14-19 in St. Louis via a combination of on-site and online resources. The theme of this year’s conference is “Science and...
LLNL joins Human Vaccines Project to accelerate vaccine development and understanding of immune response
Oct. 21, 2021 -
LLNL has joined the international Human Vaccines Project (HVP), bringing Lab expertise and computing resources to the consortium to aid development of a universal coronavirus vaccine and improve understanding of immune response. The HVP is a nonprofit, public-private partnership with a mission to decode the human immune system and accelerate the development of vaccines and immunotherapies...
Tackling the COVID-19 pandemic
Oct. 11, 2021 -
To help the U.S. fight the COVID-19 pandemic, LLNL did what it does best: quickly bring together interdisciplinary teams and diverse technologies to address urgent national challenges. This effort includes applying advanced high-performance computing resources to biological research and anayzing complicated computer models and enormous datasets. Read more in Science & Technology Review.
Lab-led effort one of nine DOE-funded data reduction projects
Sept. 17, 2021 -
An LLNL-led effort in data compression was one of nine projects recently funded by the DOE for research aimed at shrinking the amount of data needed to advance scientific discovery. Under the project—ComPRESS: Compression and Progressive Retrieval for Exascale Simulations and Sensors—LLNL scientists will seek better understanding of data-compression errors, develop models to increase trust in...
Inaugural industry forum inspires ML community
Sept. 16, 2021 -
LLNL held its first-ever Machine Learning for Industry Forum (ML4I) on August 10–12. Co-hosted by the Lab’s High-Performance Computing Innovation Center (HPCIC) and Data Science Institute (DSI), the virtual event brought together more than 500 enrollees from the Department of Energy (DOE) complex, commercial companies, professional societies, and academia. Industry sponsors included...
Visualization software stands the test of time
Sept. 13, 2021 -
In the decades since LLNL’s founding, the technology used in pursuit of the Laboratory’s national security mission has changed over time. For example, studying scientific phenomena and predicting their behaviors require increasingly robust, high-resolution simulations. These crucial tasks compound the demands on high-performance computing hardware and software, which must continually be...
COVID-19 detection and analysis with Nisha Mulakken (VIDEO)
June 7, 2021 -
LLNL biostatistician Nisha Mulakken has enhanced the Lawrence Livermore Microbial Detection Array (LLMDA) system with detection capability for all variants of SARS-CoV-2. The technology detects a broad range of organisms—viruses, bacteria, archaea, protozoa, and fungi—and has demonstrated novel species identification for human health, animal health, biodefense, and environmental sampling...
Laser-driven ion acceleration with deep learning
May 25, 2021 -
While advances in machine learning over the past decade have made significant impacts in applications such as image classification, natural language processing and pattern recognition, scientific endeavors have only just begun to leverage this technology. This is most notable in processing large quantities of data from experiments. Research conducted at LLNL is the first to apply neural...
Lab postdocs invited to prestigious Heidelberg Forum
May 21, 2021 -
Two LLNL postdoctoral researchers are among a select group of 200 scientists invited to attend the 8th Heidelberg Laureate Forum, an international conference that connects young researchers with laureates of the major prizes in mathematics and computer science. For a week in September, LLNL computational engineering postdocs Ruben Glatt and Felipe Leno da Silva will meet and interact with...
The data-driven future of extreme physics
May 19, 2021 -
By applying modern machine learning and data science methods to “extreme” plasma physics, researchers can gain insight into our universe and find clues about creating a limitless amount of energy. In a recent perspective published in Nature, LLNL scientists and international collaborators outline key challenges and future directions in using machine learning and other data-driven techniques...
Conference papers highlight importance of data security to machine learning
May 12, 2021 -
The 2021 Conference on Computer Vision and Pattern Recognition, the premier conference of its kind, will feature two papers co-authored by an LLNL researcher targeted at improving the understanding of robust machine learning models. Both papers include contributions from LLNL computer scientist Bhavya Kailkhura and examine the importance of data in building models, part of a Lab effort to...