Data Science in the News

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Heart smart: Future engineers tackle real-world cardiology concerns at LLNL's Data Science Challenge

Aug. 30, 2023 - 
It’s a quick and pain-free way to test for heart problems. That’s why the electrocardiogram is so often used by doctors—with just a few electrodes and wires, the heart’s electrical activity can be measured and interpreted to identify irregularities and disease. But while it is a highly useful and commonly used diagnostic tool, there are limits to the types of information an electrocardiogram...

UC Merced & UC Riverside tackle Data Science Challenge on ML-assisted heart modeling

Aug. 3, 2023 - 
For the first time, students from the University of California (UC) Merced and UC Riverside joined forces for the two-week Data Science Challenge (DSC) at LLNL, tackling a real-world problem in machine learning (ML)-assisted heart modeling. Held in the Livermore Valley Open Campus’s newly remodeled University of California Livermore Collaboration Center from July 10-21, the event brought...

Data Science Challenge offers students learning and growth opportunities

July 24, 2023 - 
About 20 UC Merced students spent the past two weeks working at LLNL to see if they can solve a problem that could have a significant impact on cardiology. The annual Data Science Challenge (DSC), a two-week, full-time internship at LLNL, this year teamed students from Merced and UC Riverside. They attempted to see if machine learning could address a gap in the information provided by the...

Consulting service infuses Lab projects with data science expertise

June 5, 2023 - 
A key advantage of LLNL’s culture of multidisciplinary teamwork is that domain scientists don’t need to be experts in everything. Physicists, chemists, biologists, materials engineers, climate scientists, computer scientists, and other researchers regularly work alongside specialists in other fields to tackle challenging problems. The rise of Big Data across the Lab has led to a demand for...

Celebrating the DSI’s first five years

May 18, 2023 - 
View the LLNL Flickr album Data Science Institute Turns Five. Data science—a field combining technical disciplines such as computer science, statistics, mathematics, software development, domain science, and more—has become a crucial part of how LLNL carries out its mission. Since the DSI’s founding in 2018, the Lab has seen tremendous growth in its data science community and has invested...

Patent applies machine learning to industrial control systems

May 8, 2023 - 
An industrial control system (ICS) is an automated network of devices that make up a complex industrial process. For example, a large-scale electrical grid may contain thousands of instruments, sensors, and controls that transfer and distribute power, along with computing systems that capture data transmitted across these devices. Monitoring the ICS network for new device connections, device...

From plasma to digital twins

March 13, 2023 - 
LLNL's Nondestructive Evaluation (NDE) group has an array of techniques at its disposal for inspecting objects’ interiors without disturbing them: computed tomography, optical laser interferometry, and ultrasound, for example, can be used alone or in combination to gauge whether a component’s physical and material properties fall within allowed tolerances. In one project, the team of NDE...

Understanding the universe with applied statistics (VIDEO)

Nov. 17, 2022 - 
In a new video posted to the Lab’s YouTube channel, statistician Amanda Muyskens describes MuyGPs, her team’s innovative and computationally efficient Gaussian Process hyperparameter estimation method for large data. The method has been applied to space-based image classification and released for open-source use in the Python package MuyGPyS. MuyGPs will help astronomers and astrophysicists...

LLNL to cooperate with University of Utah's one oneAPI Center of Excellence

Sept. 21, 2022 - 
The University of Utah has announced the creation of a new oneAPI Center of Excellence focused on developing portable, scalable and performant data compression techniques. The oneAPI Center will be headed out of the University of Utah’s Center for Extreme Data Management Analysis and Visualization (CEDMAV) and will involve the cooperation of LLNL’s Center for Applied Scientific Computing. It...

Panel discussion spotlights COVID-19 R&D

July 19, 2022 - 
The DSI’s career panel series continued on June 28 to highlight some of LLNL’s COVID-19 research projects. Three data scientists—Emilia Grzesiak, Derek Jones, and Priyadip Ray—joined moderator and data scientist Stewart He to talk about their work in drug screening, protein–drug compounds, antibody–antigen sequence analysis, and risk factor identification. He, who earned a PhD in Computer...

UC Merced students work with LLNL mentors on potential new drugs to combat COVID-19

June 30, 2022 - 
Students from the University of California, Merced worked with mentors at LLNL to identify drug compounds that could be used to treat COVID-19 during a two-week Data Science Challenge (DSC) that concluded on June 6. For the first time in the DSC series since the COVID-19 pandemic began in 2020, Lab mentors visited the college campus to provide in-person guidance for five teams of UC Merced...

LLNL’s Brase discusses advances by ATOM in accelerating drug discovery pipeline

June 7, 2022 - 
The private-public Accelerating Therapeutic Opportunities in Medicine (ATOM) consortium is showing “significant” progress in demonstrating that HPC and M) tools can speed up the drug discovery process, said Jim Brase, ATOM co-lead and LLNL’s deputy associate director for data science. The consortium currently boasts more than a dozen member organizations, including national laboratories...

CASC team wins best paper at visualization symposium

May 25, 2022 - 
A research team from LLNL’s Center for Applied Scientific Computing won Best Paper at the 15th IEEE Pacific Visualization Symposium (PacificVis), which was held virtually on April 11–14. Computer scientists Harsh Bhatia, Peer-Timo Bremer, and Peter Lindstrom collaborated with University of Utah colleagues Duong Hoang, Nate Morrical, and Valerio Pascucci on “AMM: Adaptive Multilinear Meshes.”...

Kevin McLoughlin applies computational biology to complex problems

May 17, 2022 - 
Kevin McLoughlin has always been fascinated by the intersection of computing and biology. His LLNL career encompasses award-winning microbial detection technology, a COVID-19 antiviral drug design pipeline, and work with the ATOM consortium. The appeal for him in these projects lies at the intersection of computing and biology. “I love finding ways to visualize data that reveal relationships...

NNSA and Cornelis Networks to collaborate on next-generation high-performance networking

May 4, 2022 - 
The Next-Generation High Performance Computing Network (NG-HPCN) project for the NNSA’s Advanced Simulation and Computing (ASC) program will enable NNSA to co-design and partner with Cornelis on development and productization of next-generation interconnect technologies for HPC. The project is led by LLNL for the NNSA Tri-Labs: LLNL, Los Alamos and Sandia national laboratories. The resulting...

Accelerating the path to precision medicine

March 22, 2022 - 
LLNL joined the Transforming Research and Clinical Knowledge in Traumatic Brain Injury (TRACK-TBI) consortium in 2018. The national, multiyear, multidisciplinary effort, led by the University of California at San Francisco in collaboration with Lawrence Berkeley and Argonne national laboratories and other leading research organizations and universities, combines neuroimaging, blood-based...

Machine learning model finds COVID-19 risks for cancer patients

March 10, 2022 - 
A new study by researchers at LLNL and the University of California, San Francisco, looks to identify cancer-related risks for poor outcomes from COVID-19. Analyzing one of the largest databases of patients with cancer and COVID-19, the team found previously unreported links between a rare type of cancer—as well as two cancer treatment-related drugs—and an increased risk of hospitalization...

LLNL team models COVID-19 disease progression and identifies risk factors

Feb. 15, 2022 - 
An LLNL team has developed a comprehensive dynamic model of COVID-19 disease progression in hospitalized patients, finding that risk factors for complications from the disease are dependent on the patient’s disease state. Using a machine learning algorithm on a dataset of electronic health records from more than 1,300 hospitalized COVID-19 patients with ProMedica — the largest health care...

COVID-19 R&D: Computing responds to pandemic

Jan. 19, 2022 - 
When the COVID-19 pandemic began, the Laboratory immediately started seeking solutions to the myriad challenges posed by the global crisis. The Computing Directorate jumped right in with research and development activities that combine molecular screening to inform antiviral drug experimentation; a generative molecular design software platform to optimize properties of antiviral drugs; an...

Digital twins for cancer patients could be ‘paradigm shift’ for predictive oncology

Dec. 16, 2021 - 
A multi-institutional team, including an LLNL contributor, has proposed a framework for digital twin models of cancer patients that researchers say would create a “paradigm shift” for predictive oncology. Published online Nature Medicine on November 25, the proposed framework for Cancer Patient Digital Twins (CPDTs) — virtual representations of cancer patients using real-time data — would...