Data Science in the News

Model for COVID-19 drug discovery a Gordon Bell finalist

A machine learning model developed by a team of LLNL scientists to aid in COVID-19 drug discovery efforts is a finalist for the Gordon Bell Special Prize for High Performance Computing-Based COVID-19 Research. Using Sierra, the world’s third fastest supercomputer, LLNL scientists produced a more accurate and efficient generative model to enable COVID-19 researchers to produce novel compounds...

From intern to mentor, Nisha Mulakken builds a career in bioinformatics

The COVID-19 pandemic has sparked a wave of new research and development at the Lab, and Nisha Mulakken is very busy. The biostatistician has enhanced the Lawrence Livermore Microbial Detection Array (LLMDA) system with detection capability for all variants of SARS-CoV-2. The technology detects a broad range of organisms—viruses, bacteria, archaea, protozoa, and fungi—and has demonstrated...

Advancing healthcare with data science (VIDEO)

This video provides an overview of projects in which data scientists work with domain scientists to address major challenges in healthcare. To help fight the COVID-19 pandemic, researchers are developing computer models to search for potential antibody and antiviral drug treatments, sharing a data portal with scientists and the general public, and analyzing drug compounds via a novel text...

Modeling neuronal cultures on 'brain-on-a-chip' devices

For the past several years, LLNL scientists and engineers have made significant progress in development of a three-dimensional “brain-on-a-chip” device capable of recording neural activity of human brain cell cultures grown outside the body. The team has developed a statistical model for analyzing the structures of neuronal networks that form among brain cells seeded on in vitro brain-on-a...

COVID-19 research goes public through new portal

A new online data portal is making available to the public a wealth of data LLNL scientists have gathered from their ongoing COVID-19 molecular design projects, particularly the computer-based “virtual” screening of small molecules and designed antibodies for interactions with the SARS-CoV-2 virus for drug design purposes. The portal houses a wealth of data LLNL scientists have gathered from...

New ML platform generates novel COVID-19 antibody sequences for experimental testing

LLNL researchers have identified an initial set of therapeutic antibody sequences, designed in a few weeks using machine learning and supercomputing, aimed at binding and neutralizing SARS-CoV-2, the virus that causes COVID-19. The research team is performing experimental testing on the chosen antibody designs. Read more at LLNL News.

Upgrades for LLNL supercomputer from AMD, Penguin Computing aid COVID-19 research

Under a new agreement, AMD will supply upgraded graphics accelerators for LLNL’s Corona supercomputing cluster, expected to nearly double the system’s peak compute power. The system will be used by scientists through the public/private COVID-19 HPC Consortium, and by LLNL researchers, who are working on discovering potential antibodies and anti-viral compounds for SARS-CoV-2, the virus that...

Local Women in Data Science conference showcases Lab research

For the third consecutive year, LLNL hosted a Women in Data Science (WiDS) regional event on March 2. The event drew dozens of attendees from LLNL, Sandia National Laboratories, local universities, and Bay Area commercial companies. Livermore was one of over 200 regional events in 60 countries coordinated with the main WiDS conference at Stanford University. According to the WiDS website...

Lab promotes diversity, tech at Women in Data Science regional event

For the third consecutive year, Lawrence Livermore National Laboratory (LLNL) hosted a Women in Data Science (WiDS) regional event on March 2. Held at the HPC Innovation Center, the event drew dozens of attendees from LLNL, Sandia National Laboratories, local universities, and Bay Area commercial companies. Livermore was one of over 200 regional events in 60 countries coordinated with the...

LLNL creates web resources to aid in fight against COVID-19

LLNL is fully committed to helping protect the U.S. from COVID-19 and to speed the recovery of those affected. As a world-class research institute, we have considerable infrastructure, unique research capabilities and a dedicated team of scientists and engineers supporting the fight against the COVID-19 pandemic. Our current COVID-19 research and response activities are focused on four broad...

New partnership to unleash U.S. supercomputing resources in the fight against COVID-19

The White House announced the launch of the COVID-19 High Performance Computing Consortium to provide COVID-19 researchers worldwide with access to the world’s most powerful high performance computing resources that can significantly advance the pace of scientific discovery in the fight to stop the virus. Read more at LLNL News.

Lab antibody, anti-viral research aids COVID-19 response

LLNL scientists are contributing to the global fight against COVID-19 by combining artificial intelligence/machine learning, bioinformatics and supercomputing to help discover candidates for new antibodies and pharmaceutical drugs to combat the disease. Armed with the virus’ predicted 3D structure and a few antibodies known to bind and neutralize SARS, an LLNL team led by Daniel Faissol and...

‘Yes, you can’: UC Merced students learning, growing at Livermore Lab

Just 90 miles UC Merced lies one of the epicenters of the future of technology, innovation and national security. The university and lab have teamed up to lay the groundwork for a direct pipeline between the two, opening a door to research collaborations as well as job and internship opportunities for students and alumni. Read more at UC Merced.

Department of Energy researchers share data management strategies at first-ever “Data Day”

It’s become something of a mantra of the digital age: Data is the new currency. Especially in science, where it’s hard to find a single project that doesn’t involve generating or consuming massive amounts of data. In light of the growing awareness of the critical importance of data management across the Department of Energy complex, more than 100 researchers from DOE national laboratories...

Livermore Lab Foundation awards scholarship to Cal State East Bay computer science student

Alan Noun, a computer science student at Cal State University East Bay and the recipient of the Livermore Lab Foundation's first full-year scholarship, has started a summer internship at LLNL. In partnership with Cal State University East Bay (CSUEB), the Livermore Lab Foundation (LLF) awarded Noun a one-year stipend to allow him to devote more time to academics by reducing work he needs to...

CASC research showcased at major data science venues

Researchers from LLNL’s Center for Applied Scientific Computing (CASC) are among the Lab’s employees making waves in the data science community, with many prominent accolades, publications, and acceptances in 2018. Data science encompasses some of the hottest technology topics—machine learning (ML), “big data” analysis, artificial intelligence, computer vision, and more—and the Center’s...

Making connections, career development highlight Women in Data Science regional event

For the second straight year, the HPC Innovation Center at LLNL played host to a Women in Data Science WiDS) regional event on March 4, drawing in dozens of attendees from LLNL, local universities and other Bay Area national laboratories. Livermore was one of more than 150 regional events held at sites across the globe in conjunction with the Global WiDS conference at Stanford University. Rea...

ESGF conference caps a productive year

Members of the Earth System Grid Federation (ESGF) gathered in Washington, DC, on December 3–7 for the 8th annual conference. The event packed 40 presentations, several plenary sessions, a poster session, guest speakers, an awards ceremony, and an executive committee meeting into the week. The Lawrence Livermore National Laboratory (LLNL) delegation comprised 19 staff from the Computation and...

Dispatches from the fall hackathon

This recap of LLNL's seasonal hackathon was provided by the web team that manages several LLNL websites. Mike Goldman, director of the Data Science Institute (DSI), stopped by the team's table during the hackathon to discuss the Open Data Initiative. Read more at LLNL Computing.

Lawrence Livermore scientists link up with Global Women in Data Science conference

LLNL's High Performance Computing Innovation Center hosted a regional event on March 5 tied in with Stanford University’s annual Women in Data Science (WiDS) conference. Nearly 70 attendees, mostly women Livermore and Sandia national laboratory employees, heard featured talks by female LLNL scientists on machine learning and data analytics, and viewed a live broadcast of the daylong world...