Data Science in the News

From intern to mentor, Nisha Mulakken builds a career in bioinformatics

The COVID-19 pandemic has sparked a wave of new research and development at the Lab, and Nisha Mulakken is very busy. The biostatistician has enhanced the Lawrence Livermore Microbial Detection Array (LLMDA) system with detection capability for all variants of SARS-CoV-2. The technology detects a broad range of organisms—viruses, bacteria, archaea, protozoa, and fungi—and has demonstrated...

AI gets a boost via LLNL, SambaNova collaboration

LLNL has installed a state-of-the-art artificial intelligence (AI) accelerator from SambaNova Systems, the National Nuclear Security Administration (NNSA) announced today, allowing researchers to more effectively combine AI and machine learning (ML) with complex scientific workloads. LLNL has begun integrating the new AI hardware, SambaNova Systems DataScale™, into the NNSA’s Corona...

LLNL, ANL and GSK provide early glimpse into Cerebras AI system performance

AI chip and systems startup Cerebras was one of many AI companies showcased at the AI Hardware Summit which concluded last week. Cerebras invited collaborators from LLNL, Argonne National Laboratory, and GlaxoSmithKline to talk about their early work on Cerebras machines and future plans. Livermore Computing's CTO Bronis de Supinski said, “We have this vision for performing cognitive...

The internship that launched a machine-learning target revolution

Kelli Humbird came to LLNL as a student intern and became a teacher of new data science techniques. In this profile, she describes her experiences and the path that led to her research inertial confinement fusion. Read more at the National Ignition Facility.

Machine learning speeds up and enhances physics calculations

Interpreting data from NIF’s cutting-edge high energy density science experiments relies on physics calculations that are so complex they can challenge LLNL supercomputers, which stand among the best in the world. A collaboration between LLNL and French researchers found a novel way to incorporate machine learning and neural networks to significantly speed up inertial confinement fusion...

Advancing healthcare with data science (VIDEO)

This video provides an overview of projects in which data scientists work with domain scientists to address major challenges in healthcare. To help fight the COVID-19 pandemic, researchers are developing computer models to search for potential antibody and antiviral drug treatments, sharing a data portal with scientists and the general public, and analyzing drug compounds via a novel text...

DL-based surrogate models outperform simulators and could hasten scientific discoveries

Surrogate models supported by neural networks can perform as well, and in some ways better, than computationally expensive simulators and could lead to new insights in complicated physics problems such as inertial confinement fusion (ICF), LLNL scientists reported. Read more at LLNL News.

AI hardware for future HPC systems (VIDEO)

This interview with Brian Spears, who leads cognitive simulations at LLNL, covers the current state of evaluation of AI chips and how those will mesh with existing and future HPC systems. Watch on YouTube.

COVID-19 research goes public through new portal

A new online data portal is making available to the public a wealth of data LLNL scientists have gathered from their ongoing COVID-19 molecular design projects, particularly the computer-based “virtual” screening of small molecules and designed antibodies for interactions with the SARS-CoV-2 virus for drug design purposes. The portal houses a wealth of data LLNL scientists have gathered from...

New ML platform generates novel COVID-19 antibody sequences for experimental testing

LLNL researchers have identified an initial set of therapeutic antibody sequences, designed in a few weeks using machine learning and supercomputing, aimed at binding and neutralizing SARS-CoV-2, the virus that causes COVID-19. The research team is performing experimental testing on the chosen antibody designs. Read more at LLNL News.

Upgrades for LLNL supercomputer from AMD, Penguin Computing aid COVID-19 research

Under a new agreement, AMD will supply upgraded graphics accelerators for LLNL’s Corona supercomputing cluster, expected to nearly double the system’s peak compute power. The system will be used by scientists through the public/private COVID-19 HPC Consortium, and by LLNL researchers, who are working on discovering potential antibodies and anti-viral compounds for SARS-CoV-2, the virus that...

Local Women in Data Science conference showcases Lab research

For the third consecutive year, LLNL hosted a Women in Data Science (WiDS) regional event on March 2. The event drew dozens of attendees from LLNL, Sandia National Laboratories, local universities, and Bay Area commercial companies. Livermore was one of over 200 regional events in 60 countries coordinated with the main WiDS conference at Stanford University. According to the WiDS website...

LLNL creates web resources to aid in fight against COVID-19

LLNL is fully committed to helping protect the U.S. from COVID-19 and to speed the recovery of those affected. As a world-class research institute, we have considerable infrastructure, unique research capabilities and a dedicated team of scientists and engineers supporting the fight against the COVID-19 pandemic. Our current COVID-19 research and response activities are focused on four broad...

New partnership to unleash U.S. supercomputing resources in the fight against COVID-19

The White House announced the launch of the COVID-19 High Performance Computing Consortium to provide COVID-19 researchers worldwide with access to the world’s most powerful high performance computing resources that can significantly advance the pace of scientific discovery in the fight to stop the virus. Read more at LLNL News.

Lab antibody, anti-viral research aids COVID-19 response

LLNL scientists are contributing to the global fight against COVID-19 by combining artificial intelligence/machine learning, bioinformatics and supercomputing to help discover candidates for new antibodies and pharmaceutical drugs to combat the disease. Armed with the virus’ predicted 3D structure and a few antibodies known to bind and neutralize SARS, an LLNL team led by Daniel Faissol and...

Lab leads effort to model proteins tied to cancer

Computational scientists, biophysicists and statisticians from LLNL and Los Alamos National Laboratory(LANL) are leading a massive multi-institutional collaboration that has developed a machine learning-based simulation for next-generation supercomputers capable of modeling protein interactions and mutations that play a role in many forms of cancer. Read more at LLNL News.

Successful simulation and visualization coupling proves the power of Sierra

As the first National Nuclear Security Administration (NNSA) production supercomputer backed by GPU- (graphics processing unit) accelerated architecture, Sierra’s acquisition required a fundamental shift in how scientists at Lawrence Livermore National Laboratory (LLNL) program their codes to take advantage of the GPUs. The majority of Sierra’s computational power—95 percent of its 125...

Cindy Gonzales forges a new career in data science

Through LLNL’s Data Science Immersion Program, Gonzales is now among the Lab’s newest data scientists. For two and a half years, she juggled a demanding workload—coordinating Computing’s Scholar Program, interning with data scientists, learning from mentors, supporting LLNL’s Data Science Institute, and attending college part time—while also having her first child. Read more at LLNL Computing...

Collaboration drives data science workshop

Lawrence Livermore National Laboratory’s (LLNL’s) Data Science Institute (DSI) hosted its second annual workshop on July 23–24, 2019. Co-sponsored by the University of California (UC) system, the event drew more than 200 participants to Garré Winery in Livermore. A common theme ran throughout both days: Collaboration is always welcome. Indeed, feedback from last year’s workshop inspired a...

New open-air facility will be testing ground for autonomous drones, vehicles and robots

LLNL’s new OS-150 Robotics Laboratory is an outdoor, 8,000 square-foot enclosure that will serve as a proving ground for the autonomous drones, vehicles and robots of the future. Informally known as the "drone pen," the 50-foot-tall rectangular enclosure, located directly across from one of the Lab’s main engineering buildings, is allowing operators to pilot their drones safely and...